Your browser doesn't support javascript.
loading
Mostrar: 20 | 50 | 100
Resultados 1 - 20 de 21
Filtrar
1.
Int J Obes (Lond) ; 47(5): 348-357, 2023 05.
Artículo en Inglés | MEDLINE | ID: mdl-36828899

RESUMEN

BACKGROUND AND OBJECTIVE: The effect of exercise training on whole-body insulin sensitivity has not been systematically summarized. We aimed to summarize the data from randomized controlled trials evaluating the effect of exercise training on insulin action, in adults. SUBJECTS: MEDLINE, EMBASE, and CENTRAL databases were searched until January 2021. Randomized controlled trials lasting ≥4 weeks, including adults, and evaluating the effect of exercise on insulin-stimulated glucose disposal measured using the hyperinsulinemic euglycemic clamp, were included. METHODS: Three reviewers extracted summary data from published trials. The primary outcome was insulin-stimulated glucose disposal. Standardized weighted mean differences (SMD) in glucose disposal between intervention and control were compared. The PEDro scale was used to assess risk of bias. RESULTS: We included 25 trials (36 interventions, N = 851). Exercise increased insulin-stimulated glucose disposal relative to control, SMD = 0.52 (95% confidence interval [CI]: 0.39, 0.65; p < 0.001; I2 = 47%) without significantly suppressing hepatic glucose production. In trials without isotopic tracers, exercise increased glucose disposal (SMD = 0.63; 95% CI: 0.48, 0.77; p < 0.001, I2 = 55%). In trials with isotopic tracers, exercise increased glucose disposal only when tracers were added to the exogenous glucose used for clamping (SMD = 0.34; 95% CI: 0.03, 0.66, p = 0.034. I2 = 0%). In a meta-regression model including aerobic exercise, weight change, and tracer technique, only percent weight change explained between trial heterogeneity (ß = 0.069; 95% CI: 0.005, 0.013). The PEDro rating indicated relatively low risk of bias (5.8 ± 0.22). CONCLUSIONS: Exercise training for at least four weeks significantly increases insulin-stimulated glucose disposal. Weight loss maximizes the effect and may be needed to improve hepatic insulin sensitivity. Differences in tracer methodology contribute to divergent outcomes and should be considered when assessing conclusions from research examining the effect of exercise on insulin action. REGISTRATION: PROSPERO (CRD42019124381).


Asunto(s)
Resistencia a la Insulina , Insulina , Adulto , Humanos , Glucosa , Ensayos Clínicos Controlados Aleatorios como Asunto , Ejercicio Físico
2.
Clin Infect Dis ; 76(3): e995-e1003, 2023 02 08.
Artículo en Inglés | MEDLINE | ID: mdl-35879465

RESUMEN

BACKGROUND: Risk factors for nontuberculous mycobacteria (NTM) infections after solid organ transplant (SOT) are not well characterized. Here we aimed to describe these factors. METHODS: Retrospective, multinational, 1:2 matched case-control study that included SOT recipients ≥12 years old diagnosed with NTM infection from 1 January 2008 to 31 December 2018. Controls were matched on transplanted organ, NTM treatment center, and post-transplant survival greater than or equal to the time to NTM diagnosis. Logistic regression on matched pairs was used to assess associations between risk factors and NTM infections. RESULTS: Analyses included 85 cases and 169 controls (59% male, 88% White, median age at time of SOT of 54 years [interquartile range {IQR} 40-62]). NTM infection occurred in kidney (42%), lung (35%), heart and liver (11% each), and pancreas transplant recipients (1%). Median time from transplant to infection was 21.6 months (IQR 5.3-55.2). Most underlying comorbidities were evenly distributed between groups; however, cases were older at the time of NTM diagnosis, more frequently on systemic corticosteroids and had a lower lymphocyte count (all P < .05). In the multivariable model, older age at transplant (adjusted odds ratio [aOR] 1.04; 95 confidence interval [CI], 1.01-1.07), hospital admission within 90 days (aOR, 3.14; 95% CI, 1.41-6.98), receipt of antifungals (aOR, 5.35; 95% CI, 1.7-16.91), and lymphocyte-specific antibodies (aOR, 7.73; 95% CI, 1.07-56.14), were associated with NTM infection. CONCLUSIONS: Risk of NTM infection in SOT recipients was associated with older age at SOT, prior hospital admission, receipt of antifungals or lymphocyte-specific antibodies. NTM infection should be considered in SOT patients with these risk factors.


Asunto(s)
Infecciones por Mycobacterium no Tuberculosas , Trasplante de Órganos , Humanos , Masculino , Persona de Mediana Edad , Niño , Femenino , Estudios de Casos y Controles , Receptores de Trasplantes , Estudios Retrospectivos , Antifúngicos , Infecciones por Mycobacterium no Tuberculosas/microbiología , Trasplante de Órganos/efectos adversos , Factores de Riesgo , Micobacterias no Tuberculosas
3.
Healthcare (Basel) ; 10(12)2022 Dec 02.
Artículo en Inglés | MEDLINE | ID: mdl-36553962

RESUMEN

The new NICE guideline for myalgic encephalomyelitis/chronic fatigue syndrome (ME/CFS), published in October 2021, makes significant changes in treatment recommendations. It acknowledges the complexity of this chronic medical condition, which always impacts quality of life and can be profoundly disabling, recognising the prejudice and stigma that people with ME/CFS often experience in the absence of any specific diagnostic test. The guideline outlines steps for accurate diagnosis, recognising post-exertional malaise as a core symptom; importantly, ME/CFS can now be diagnosed after just 3 months in a bid to improve long-term health outcomes. It recommends the need for individual, tailored management by a multi-disciplinary team, ensuring that the wellbeing of the individual is paramount. The guideline makes clear that any programme based on fixed incremental increases in physical activity or exercise, for example, graded exercise therapy (GET), should not be offered as a treatment for ME/CFS and emphasises that cognitive behavioural therapy (CBT) should only be offered as a supportive intervention. Because of the rigorous methodology required by NICE Committee review and the inclusion of the testimony of people with lived experience as committee members, this guideline will influence the future diagnosis and management of ME/CFS in the UK and beyond.

4.
Medicina (Kaunas) ; 56(10)2020 Sep 24.
Artículo en Inglés | MEDLINE | ID: mdl-32987967

RESUMEN

Research investigating hydration strategies specialized for women's soccer players is limited, despite the growth in the sport. The purpose of this study was to determine the effects of fluid balance and electrolyte losses in collegiate women's soccer players. Eighteen NCAA Division I women's soccer players were recruited (age: 19.2 ± 1.0 yr; weight: 68.5 ± 9.0 kg, and height: 168.4 ± 6.7 cm; mean ± SD), including: 3 forwards (FW), 7 mid-fielders (MD), 5 defenders (DF), and 3 goalkeepers (GK). Players practiced outdoor during spring off-season training camp for a total 14 practices (WBGT: 18.3 ± 3.1 °C). The main outcome measures included body mass change (BMC), sweat rate, urine and sweat electrolyte concentrations, and fluid intake. Results were analyzed for comparison between low (LOW; 16.2 ± 2.6° C, n = 7) and moderate risk environments for hyperthermia (MOD; 20.5 ± 1.5 °C, n = 7) as well as by field position. The majority (54%) of players were in a hypohydrated state prior to practice. Overall, 26.7% of players had a %BMC greater than 0%, 71.4% of players had a %BMC less than -2%, and 1.9% of players had a %BMC greater than -2% (all MD position). Mean %BMC and sweat rate in all environmental conditions were -0.4 ± 0.4 kg (-0.5 ± 0.6% body mass) and 1.03 ± 0.21 mg·cm-2·min-1, respectively. In the MOD environment, players exhibited a greater sweat rate (1.07 ± 0.22 mg·cm-2·min-1) compared to LOW (0.99 ± 0.22 mg·cm-2·min-1; p = 0.02). By position, DF had a greater total fluid intake and a lower %BMC compared to FW, MD, and GK (all p < 0.001). FW had a greater sweat sodium (Na+) (51.4 ± 9.8 mmol·L-1), whereas GK had the lowest sweat sodium (Na+) (30.9 ± 3.9 mmol·L-1). Hydration strategies should target pre-practice to ensure players are adequately hydrated. Environments deemed to be of moderate risk of hyperthermia significantly elevated the sweat rate but did not influence fluid intake and hydration status compared to low-risk environments. Given the differences in fluid balance and sweat responses, recommendations should be issued relative to soccer position.


Asunto(s)
Fútbol , Adolescente , Adulto , Deshidratación , Electrólitos , Femenino , Humanos , Sodio , Sudor , Equilibrio Hidroelectrolítico , Adulto Joven
5.
Ochsner J ; 20(2): 134-138, 2020.
Artículo en Inglés | MEDLINE | ID: mdl-32612465

RESUMEN

Background: Cases of COVID-19 family clusters have been reported across the globe. While disease severity can vary widely, reports of severe infection leading to multiple fatalities within a family are limited. Case Report: Four family members each presented to the emergency department with fever and upper respiratory symptoms. Each individual tested positive for severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection via nasopharyngeal swab. All individuals developed acute respiratory distress syndrome refractory to conventional medical therapy and subsequently died from their disease. Conclusion: This report describes a familial cluster of fatal COVID-19 infections and suggests a potential genetic predisposition for severe disease, emphasizing the importance of investigating family clusters of severe COVID-19 infection to determine host and viral factors that may predispose to a severe disease course. Such investigations could improve our understanding of the disease and guide preventive measures for at-risk populations.

6.
J Perianesth Nurs ; 35(4): 353-356, 2020 08.
Artículo en Inglés | MEDLINE | ID: mdl-32561253

RESUMEN

Nurses have historically led efforts to improve the health of populations while simultaneously and unselfishly providing care during pivotal moments of national need. The COVID-19 pandemic has placed an unprecedented strain on the US health care system, including severe shortages of hospital beds, supplies, equipment, pharmaceuticals, and healthy frontline clinicians. Perioperative and perianesthesia leaders and clinicians have unique opportunities to provide patient care during the COVID-19 crisis. In this manuscript, we describe the initial changing roles and contributions of perioperative and perianesthesia registered nurses during the COVID-19 pandemic and share recent experiences from a military medical center. Perioperative and perianesthesia nurses are vital to the overall nursing viability of the health care system, as they possess the requisite knowledge and skills to provide expert clinical care in many hospital settings and meet the demands of a global pandemic.


Asunto(s)
Infecciones por Coronavirus/terapia , Hospitales Militares , Enfermería Perioperatoria/organización & administración , Neumonía Viral/terapia , COVID-19 , Competencia Clínica , Infecciones por Coronavirus/epidemiología , Humanos , Rol de la Enfermera , Pandemias , Neumonía Viral/epidemiología , Estados Unidos/epidemiología
7.
Genome Res ; 29(4): 635-645, 2019 04.
Artículo en Inglés | MEDLINE | ID: mdl-30894395

RESUMEN

Large-scale population analyses coupled with advances in technology have demonstrated that the human genome is more diverse than originally thought. To date, this diversity has largely been uncovered using short-read whole-genome sequencing. However, these short-read approaches fail to give a complete picture of a genome. They struggle to identify structural events, cannot access repetitive regions, and fail to resolve the human genome into haplotypes. Here, we describe an approach that retains long range information while maintaining the advantages of short reads. Starting from ∼1 ng of high molecular weight DNA, we produce barcoded short-read libraries. Novel informatic approaches allow for the barcoded short reads to be associated with their original long molecules producing a novel data type known as "Linked-Reads". This approach allows for simultaneous detection of small and large variants from a single library. In this manuscript, we show the advantages of Linked-Reads over standard short-read approaches for reference-based analysis. Linked-Reads allow mapping to 38 Mb of sequence not accessible to short reads, adding sequence in 423 difficult-to-sequence genes including disease-relevant genes STRC, SMN1, and SMN2 Both Linked-Read whole-genome and whole-exome sequencing identify complex structural variations, including balanced events and single exon deletions and duplications. Further, Linked-Reads extend the region of high-confidence calls by 68.9 Mb. The data presented here show that Linked-Reads provide a scalable approach for comprehensive genome analysis that is not possible using short reads alone.


Asunto(s)
Estudio de Asociación del Genoma Completo/métodos , Polimorfismo Genético , Secuenciación Completa del Genoma/métodos , Línea Celular , Genoma Humano , Humanos , Péptidos y Proteínas de Señalización Intercelular , Proteínas de la Membrana/genética , Proteína 1 para la Supervivencia de la Neurona Motora/genética , Proteína 2 para la Supervivencia de la Neurona Motora/genética
8.
Nat Biotechnol ; 34(3): 303-11, 2016 Mar.
Artículo en Inglés | MEDLINE | ID: mdl-26829319

RESUMEN

Haplotyping of human chromosomes is a prerequisite for cataloguing the full repertoire of genetic variation. We present a microfluidics-based, linked-read sequencing technology that can phase and haplotype germline and cancer genomes using nanograms of input DNA. This high-throughput platform prepares barcoded libraries for short-read sequencing and computationally reconstructs long-range haplotype and structural variant information. We generate haplotype blocks in a nuclear trio that are concordant with expected inheritance patterns and phase a set of structural variants. We also resolve the structure of the EML4-ALK gene fusion in the NCI-H2228 cancer cell line using phased exome sequencing. Finally, we assign genetic aberrations to specific megabase-scale haplotypes generated from whole-genome sequencing of a primary colorectal adenocarcinoma. This approach resolves haplotype information using up to 100 times less genomic DNA than some methods and enables the accurate detection of structural variants.


Asunto(s)
Haplotipos/genética , Secuenciación de Nucleótidos de Alto Rendimiento/métodos , Neoplasias/genética , Análisis de Secuencia de ADN/métodos , ADN/genética , Genoma Humano , Variación Estructural del Genoma , Células Germinativas , Humanos , Conformación de Ácido Nucleico , Proteínas de Fusión Oncogénica/genética , Polimorfismo de Nucleótido Simple
9.
Anal Chem ; 85(23): 11619-27, 2013 Dec 03.
Artículo en Inglés | MEDLINE | ID: mdl-24180464

RESUMEN

Two years ago, we described the first droplet digital PCR (ddPCR) system aimed at empowering all researchers with a tool that removes the substantial uncertainties associated with using the analogue standard, quantitative real-time PCR (qPCR). This system enabled TaqMan hydrolysis probe-based assays for the absolute quantification of nucleic acids. Due to significant advancements in droplet chemistry and buoyed by the multiple benefits associated with dye-based target detection, we have created a "second generation" ddPCR system compatible with both TaqMan-probe and DNA-binding dye detection chemistries. Herein, we describe the operating characteristics of DNA-binding dye based ddPCR and offer a side-by-side comparison to TaqMan probe detection. By partitioning each sample prior to thermal cycling, we demonstrate that it is now possible to use a DNA-binding dye for the quantification of multiple target species from a single reaction. The increased resolution associated with partitioning also made it possible to visualize and account for signals arising from nonspecific amplification products. We expect that the ability to combine the precision of ddPCR with both DNA-binding dye and TaqMan probe detection chemistries will further enable the research community to answer complex and diverse genetic questions.


Asunto(s)
ADN/análisis , Colorantes Fluorescentes/química , Reacción en Cadena de la Polimerasa Multiplex/métodos , ADN/metabolismo , Colorantes Fluorescentes/metabolismo , Humanos , Unión Proteica/fisiología , Reacción en Cadena en Tiempo Real de la Polimerasa/métodos
10.
Protein Expr Purif ; 92(2): 171-82, 2013 Dec.
Artículo en Inglés | MEDLINE | ID: mdl-24045055

RESUMEN

Melan-A is a cancer testis antigen commonly found in melanoma, and has been shown to stimulate the body's immune response against cancerous cells. We have developed and executed a process utilizing current good manufacturing practices (cGMP) to produce the 6 times-His tagged protein in C41DE3 Escherichia coli for use in Phase I clinical trials. Approximately 11 g of purified Melan-A were produced from a 20 L fed-batch fermentation. Purification was achieved through a three column process utilizing immobilized metal affinity, anion exchange, and cation exchange chromatography with a buffer system optimized for low-solubility, high LPS binding capacity proteins. The host cell proteins, residual DNA, and endotoxin concentration were well below limits for a prescribed dose with a final purity level of 91%.


Asunto(s)
Vacunas contra el Cáncer , Histidina/metabolismo , Antígeno MART-1/metabolismo , Proteínas Recombinantes de Fusión/aislamiento & purificación , Proteínas Recombinantes de Fusión/metabolismo , Investigación Biomédica , Química Farmacéutica , Cromatografía por Intercambio Iónico , Fermentación , Histidina/química , Histidina/genética , Antígeno MART-1/química , Antígeno MART-1/genética , Estabilidad Proteica , Proteínas Recombinantes de Fusión/química , Proteínas Recombinantes de Fusión/genética , Reproducibilidad de los Resultados
11.
Chem Commun (Camb) ; 49(33): 3376-88, 2013 Apr 28.
Artículo en Inglés | MEDLINE | ID: mdl-23440341

RESUMEN

Norbornane and fused [n]polynorbornane frameworks are readily synthesised, can be tailored to a variety of predictable geometries and can be functionalised regiospecifically. As such, these highly preorganised scaffolds offer the supramolecular chemist an excellent starting point when designing hosts for specific guests. This feature article will highlight the evolution of our research from relatively simple norbornane based anion receptors to more sophisticated tetrathioureido functionalised fused [n]polynorbornane hosts.

12.
J Org Chem ; 77(19): 8507-17, 2012 Oct 05.
Artículo en Inglés | MEDLINE | ID: mdl-22989297

RESUMEN

A family of conformationally preorganized, [n]polynorbornane-based anion hosts 1a,b-6a,b have been synthesized. The series includes receptors with 4, 8, and 12 H-bond donors. Using (1)H NMR titration techniques, evaluation of the new hosts against a series of alkyl and aryl dicarboxylates as well as a range of phosphoanionic species has revealed that the tris(thioureido) hosts (in particular 3a) are capable of regioselectively binding dicarboxylates and pyrophosphate (H(2)PPi(2-)).


Asunto(s)
Aniones/química , Norbornanos/química , Organofosfatos/química , Tiourea/química , Espectroscopía de Resonancia Magnética , Conformación Molecular , Estructura Molecular , Estereoisomerismo
13.
Methods Mol Biol ; 899: 265-75, 2012.
Artículo en Inglés | MEDLINE | ID: mdl-22735959

RESUMEN

Endotoxin removal is critical when producing therapeutic proteins in bacterial systems. This hydrophobic compound can be removed through chromatography or filtration, but presents unique challenges dependent upon protein composition as well as production scale. Here we present a robust method for endotoxin removal at the pilot production scale using fast protein liquid chromatography and buffers specifically engineered for endotoxin removal.


Asunto(s)
Cromatografía Liquida/métodos , Endotoxinas/química , Lipopolisacáridos/química , Proteínas Recombinantes , Tampones (Química) , Pared Celular/química , Endotoxinas/aislamiento & purificación , Escherichia coli/química , Escherichia coli/genética , Octoxinol , Polietilenglicoles/química , Proteínas Recombinantes/biosíntesis , Proteínas Recombinantes/genética , Proteínas Recombinantes/aislamiento & purificación
14.
Biotechnol Prog ; 27(2): 435-41, 2011.
Artículo en Inglés | MEDLINE | ID: mdl-21365782

RESUMEN

NY-ESO-1 is a cancer testis antigen expressed in numerous cancers. Initial tests have shown its efficacy as a cancer vaccine, stimulating the body's own immune response against the invading tumor. To produce enough material for phase I clinical trials, a process using current good manufacturing practices to produce clinical grade material was developed and executed. His-tagged NY-ESO-1 was expressed in C41DE3 Escherichia coli under control of the T-7 promoter. NY-ESO-1 was produced in a 20 L fed-batch fermentation utilizing a pH-stat control scheme. The protein was then purified from inclusion bodies using a three-column process that achieved a yield of over 3.4 g and endotoxin below the detection limit of 0.005 EU/µg protein.


Asunto(s)
Antígenos de Neoplasias/biosíntesis , Vacunas contra el Cáncer/biosíntesis , Ensayos Clínicos como Asunto , Proteínas de la Membrana/biosíntesis , Testículo/inmunología , Antígenos de Neoplasias/aislamiento & purificación , Ensayos Clínicos como Asunto/métodos , Clonación Molecular/métodos , Endotoxinas/análisis , Escherichia coli/genética , Humanos , Masculino , Proteínas de la Membrana/aislamiento & purificación
15.
Anal Chem ; 82(13): 5810-4, 2010 Jul 01.
Artículo en Inglés | MEDLINE | ID: mdl-20527817

RESUMEN

Single nucleotide polymorphisms (SNPs) are one of the key diagnostic markers for genetic disease, cancer progression, and pharmcogenomics. The ligase detection reaction (LDR) is an excellent method to identify SNPs, combining low detection limits and high specificity. We present the first multiplex LDR-surface enhanced Raman spectroscopy (SERS) SNP genotyping scheme. The platform has the advantage in that the diagnostic peaks of Raman are more distinct than fluorescence, and in theory, a clinically significant number of markers can be multiplexed in a single sample using different SERS reporters. Here we report LDR-SERS multiplex SNP genotyping of K-Ras oncogene alleles at 10 pM detection levels, optimization of DNA labeling as well as Raman conditions, and the linear correlation of diagnostic peak intensity to SNP target concentration in heterozygous samples. Genomic DNA from typed cells lines was obtained and scored for the K-Ras genotype. These advances are significant as we have further developed our new SNP genotyping platform and have demonstrated the ability to correlate genotype ratios directly to diagnostic Raman peak signal intensity.


Asunto(s)
Reacción en Cadena de la Ligasa/métodos , Polimorfismo de Nucleótido Simple , Espectrometría Raman/métodos , Genotipo , Proteínas ras/genética , Proteínas ras/metabolismo
16.
Appl Microbiol Biotechnol ; 87(2): 401-10, 2010 Jun.
Artículo en Inglés | MEDLINE | ID: mdl-20422181

RESUMEN

Recombinant immunotherapeutics are important biologics for the treatment and prevention of various diseases. Immunotherapy can be divided into two categories, passive and active. For passive immunotherapy, the successes of antibody and cytokine therapeutics represent a promising future and opportunities for improvements. Efforts, such as cell engineering, antibody engineering, human-like glycosylation in yeast, and Fab fragment development, have led the way to improve antibody efficacy while decreasing its high manufacturing costs. Both new cytokines and currently used cytokines have demonstrated therapeutic effects for different indications. As for active immunotherapy, recently approved HPV vaccines have encouraged the development of preventative vaccines for other infectious diseases. Immunogenic antigens of pathogenic bacteria can now be identified by genomic means (reverse vaccinology). Due to the recent outbreaks of pandemic H1N1 influenza virus, recombinant influenza vaccines using virus-like particles and other antigens have also been engineered in several different recombinant systems. However, limitations are found in existing immunotherapeutics for cancer treatment, and recent development of therapeutic cancer vaccines such as MAGE-A3 and NY-ESO-1 may provide alternative therapeutic strategy.


Asunto(s)
Anticuerpos/uso terapéutico , Citocinas/uso terapéutico , Inmunoterapia , Proteínas Recombinantes/uso terapéutico , Vacunas/uso terapéutico , Animales , Anticuerpos/genética , Anticuerpos/inmunología , Biotecnología/economía , Citocinas/genética , Citocinas/inmunología , Humanos , Inmunoterapia/economía , Proteínas Recombinantes/genética , Proteínas Recombinantes/inmunología , Vacunas/genética , Vacunas/inmunología
17.
Org Biomol Chem ; 7(20): 4233-40, 2009 Oct 21.
Artículo en Inglés | MEDLINE | ID: mdl-19795062

RESUMEN

The affinity of new di-, tri- and tetrathiourea functionalised fused [3] and [5]polynorbornane based hosts 1-6 towards terephthalate2- was proportional to the size of the preorganised cleft/cavity imparted by the polynorbornane scaffold. Receptors based on the [5]polynobornane framework had greater affinities for the anion due to a higher degree of host:guest size complementarity. Hosts 1-5 formed 1:1 host:guest complexes with the rigid dianion, yet remarkably, host 6 was found to bind two terephthalate guests.


Asunto(s)
Canfanos/química , Ácidos Ftálicos/química , Tiourea/química , Enlace de Hidrógeno , Espectroscopía de Resonancia Magnética , Modelos Moleculares , Conformación Molecular
18.
J Am Chem Soc ; 131(6): 2208-13, 2009 Feb 18.
Artículo en Inglés | MEDLINE | ID: mdl-19199618

RESUMEN

Genomics provides a comprehensive view of the complete genetic makeup of an organism. Individual sequence variations, as manifested by single nucleotide polymorphisms (SNPs), can provide insight into the basis for a large number of phenotypes and diseases including cancer. The ability rapidly screen for SNPs will have a profound impact on a number of applications, most notably personalized medicine. Here we demonstrate a new approach to SNP detection through the application of surface-enhanced Raman scattering (SERS) to the ligase detection reaction (LDR). The reaction uses two LDR primers, one of which contains a Raman enhancer and the other a reporter dye. In LDR, one of the primers is designed to interrogate the SNP. When the SNP being interrogated matches the discriminating primer sequence, the primers are ligated and the enhancer and dye are brought into close proximity enabling the dye's Raman signature to be detected. By detecting the Raman signature of the dye rather than its fluorescence emission, our technique avoids the problem of spectral overlap which limits number of reactions which can be carried out in parallel by existing systems. We demonstrate the LDR-SERS reaction for the detection of point mutations in the human K-ras oncogene. The reaction is implemented in an electrokinetically active microfluidic device that enables physical concentration of the reaction products for enhanced detection sensitivity and quantization. We report a limit of detection of 20 pM of target DNA with the anticipated specificity engendered by the LDR platform.


Asunto(s)
Análisis Mutacional de ADN/métodos , ADN/análisis , ADN/genética , Reacción en Cadena de la Ligasa/métodos , Polimorfismo de Nucleótido Simple , Espectrometría Raman/métodos , Genes ras , Humanos , Modelos Moleculares , Mutación Puntual
19.
Chem Commun (Camb) ; (16): 1871-3, 2008 Apr 28.
Artículo en Inglés | MEDLINE | ID: mdl-18401502

RESUMEN

Remarkably strong binding of the new [5]polynorbornane based host to the terephthalate dianion is based on size complementarity of the preorganised binding cleft with the rigid dicarboxylate guest.


Asunto(s)
Norbornanos/química , Ácidos Ftálicos/química , Tiourea/química , Aniones/química , Carbono/química , Hidrógeno/química , Espectroscopía de Resonancia Magnética , Modelos Moleculares , Estructura Molecular , Nitrógeno/química , Volumetría
20.
Org Biomol Chem ; 5(9): 1343-6, 2007 May 07.
Artículo en Inglés | MEDLINE | ID: mdl-17464401

RESUMEN

Based on (1)H NMR studies, subtle electronic factors rather than pre-organisation dictate the binding stoichiometry of the new, norbornene based, anion hosts 1 and 2 with acetate, however, the binding of dihydrogenphosphate appears to be based solely on steric constraints.


Asunto(s)
Electrones , Norbornanos/química , Aniones/química , Ciclopentanos/química , Cinética , Espectroscopía de Resonancia Magnética , Maleatos/química , Conformación Molecular , Electricidad Estática , Relación Estructura-Actividad
SELECCIÓN DE REFERENCIAS
DETALLE DE LA BÚSQUEDA
...